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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902199.1_cds_XP_016452200.1_46464
CDS Infomation

[gene=LOC107776789] [db_xref=GeneID:107776789] [protein=ubiquitin carboxyl-terminal hydrolase 6-like isoform X2] [protein_id=XP_016452200.1] [location=join(10582..10591,11613..11758,11919..11954,12041..12148,12721..12821,13469..13595,14074..14133,14248..14315,14522..14572,15342..15450,16023..16111,16592..16661,24017..24097,24215..24310,24473..24518,25522..25641,25736..25810,25980..26035)] [gbkey=CDS]
Sequence

ATGGTCACAGTAAGTGTAAAGTGGCAAAAAGAAGTCTATCCTGCTGTGGAAATTGACACT
AGCCAGCCTCCATATGTTTTCAAAGCCCAGCTGTATGATCTAACAGGGGTACCACCTGAA
AGGCAAAAGATAATGGTCAAAGGTGGTTTGCTTAAGGACGATGCCGACTGGTCGAAAGTA
GGAGTAAAAGAGGGTCAAAGGCTGATGATGATGGGAACTGCAGATGAGATTGTGAAGGCC
CCCGAGAAGGGTCCTGTTTTTGCTGAAGATTTACCTGAAGAAGAGCAAGTGGTTAATGTA
GGTCATTCTGCTGGATTATTTAATCTCGGAAATACATGCTACATGAACTCCACAGTACAG
TGCTTGCATTCAGTTCCAGAACTGAAGTCTGCTCTAACAGAGTATAACCAGCTTGGTAGA
AGCAATGATTTGGATCACTCATCTCATCTCTTGACAGTTGCAACAAGAGATCTGTTTAAT
GACCTGGATAAAAATGTCAAACCAGTGGCACCAATGCAATTCTGGACGGTTTTGCGGAAG
AAATATCCTCAATTTGGCCAGCAGAGCAATGGAGCTTTCATGCAACAGGATGCTGAAGAA
TGTTGGACGCAACTACTTTACACCCTTTCTCAGTCTCTTAAATCACCGAACTCTAGTGGA
AGTCCGGATATTGTGAAGGCTCTCTTCGGTATTGAGTTTGACAACAGGATTCATTGTGCT
GAAAGTGGTGAAGAAAGCACAGAAACAGAAACTGTATATTCCCTTAAATGCCACATTTCA
CAGGAAGTGAACCATTTGCATGAGGGTTTGAAACGTGGTCTGAAATCAGAACTGGAGAAG
GCGTCTCCGTCACTTGGACGGAGTGCAGTTTATGTGAAAGACTCCCGAATCAATGGCTTG
CCAAGATACTTGACCATTCAGTTCGTCCGGTTTTTCTGGAAGAGGGAATCAAATCAAAAG
GCAAAGATTTTGCGGAAAGTGGATTACCCGCTGTCGTTGGATGTATATGATTTTTGTTCG
GAAGACCTTCGCAAGAAACTGGAAGGTCCTCGCCAGGTTTTGAGGGATGCTGAAGGTAAG
AAGGCCGGTTTAAAAACCAGTGAGAAAACTTCAAGTTCAACTGACGGCGACGTTAAAATG
ACTGAGGCTGAGGAATCATCTAGTGGAAGTGGAGAAGCGTCTAAAACAACCCAAGAAGGT
GTTCTGCCTGAGAAGGAACACCACTTGACTGGAATATATGATTTGGTGGCCGTGCTGACT
CACAAGGGAAGAAGTGCTGACTCTGGGCATTATGTTGCCTGGGTCAAGCAAGAAAACGGA
AAGTGGGTTCAATTTGATGATGACAATCCAATTCCGCAGAGAGAAGAGGACATCCCTAAA
CTTTCAGGAGGTGGTGATTGGCATATGGCTTATATTTGCATGTACAAGGCCCGTGTTGTT
CCCATGTGA

Peptide Sequence

PEP ID

XP_016452200.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like isoform X2 [Nicotiana tabacum]
Sequence

MVTVSVKWQKEVYPAVEIDTSQPPYVFKAQLYDLTGVPPERQKIMVKGGLLKDDADWSKV
GVKEGQRLMMMGTADEIVKAPEKGPVFAEDLPEEEQVVNVGHSAGLFNLGNTCYMNSTVQ
CLHSVPELKSALTEYNQLGRSNDLDHSSHLLTVATRDLFNDLDKNVKPVAPMQFWTVLRK
KYPQFGQQSNGAFMQQDAEECWTQLLYTLSQSLKSPNSSGSPDIVKALFGIEFDNRIHCA
ESGEESTETETVYSLKCHISQEVNHLHEGLKRGLKSELEKASPSLGRSAVYVKDSRINGL
PRYLTIQFVRFFWKRESNQKAKILRKVDYPLSLDVYDFCSEDLRKKLEGPRQVLRDAEGK
KAGLKTSEKTSSSTDGDVKMTEAEESSSGSGEASKTTQEGVLPEKEHHLTGIYDLVAVLT
HKGRSADSGHYVAWVKQENGKWVQFDDDNPIPQREEDIPKLSGGGDWHMAYICMYKARVV
PM

Transcript Sequence

Gene sequence data has not been registered.